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Species belonging to selected taxon:
Agrostis stolonifera
,
Oryza sativa
,
Avena barbata
,
Avena sativa
,
Festuca arundinacea
,
Festuca pratensis
,
Hordeum vulgare
,
Hordeum vulgare subsp. spontaneum
,
Leymus cinereus x Leymus triticoides
,
Lolium perenne
,
Pseudoroegneria spicata
,
Triticum monococcum
,
Triticum turgidum subsp. durum
,
Brachypodium distachyon
,
Triticum aestivum
ABOUT THIS RECORD
ID:
MNEST005893
species:
Triticum aestivum
miRNA family:
MIR2015
source:
miRNEST
Taxonomy by NCBI:
Triticum aestivum
Triticum
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGCATCATCTCGAACTCGTCG
miRNA*
ACGAGTTCCAGACGATGCAGG
mismatches:
3
bulges:
0
View larger
pre-miRNA
TTGGCCTCCTTGTGGAAGCCC
TGCATCATCTCGAACTCGTCG
GTGCGATAGCGTGCAGCGTGACATGCTGTTCATCACCA
ACGAGTTCCAGACGATGCAG
G
CCTTCATCAAGGTGGAGC
dot-bracket secondary structure
....((.(((((..((((.((
((((((.(((.((((((((.(
(((.(((((((((((...)).)))))))))...)))).
)))))))).))).)))))))
)
.))))..))))).))...
SIMILARITIES
miRBase
no hits
PMRD
tae-miR2015
:
4e-47
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
Identical with:
tae-miR2015
from PMRD (
MNEST054731
)
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record